com.wcohen.secondstring
Class AffineGap.MatrixTrio.InsertSMatrix

java.lang.Object
  |
  +--com.wcohen.secondstring.MemoMatrix
        |
        +--com.wcohen.secondstring.AffineGap.MatrixTrio.InsertSMatrix

Enclosing class:

AffineGap.MatrixTrio

protected class AffineGap.MatrixTrio.InsertSMatrix

extends MemoMatrix

Field Summary

Fields inherited from class com.wcohen.secondstring.MemoMatrix

cellFormat, s, t

Constructor Summary

AffineGap.MatrixTrio.InsertSMatrix(StringWrapper s, StringWrapper t)

Method Summary

double

compute(int i, int j)

Methods inherited from class com.wcohen.secondstring.MemoMatrix

max3, max4, sAt, tAt, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

AffineGap.MatrixTrio.InsertSMatrix

public AffineGap.MatrixTrio.InsertSMatrix(StringWrapper s,
                                          StringWrapper t)

Method Detail

compute

public double compute(int i,
                      int j)

Overrides:

compute in class MemoMatrix